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AlpineWithoutPasswords
Alpine without a password How to use SSH and Alpine so that you don't have to type in a password when you start your Alpine session. Alpine has the ability to con...
BatchDetails
Details of running condor at Nevis Warning signs If your condor script or program does any of the following, it's a warning sign that your job might crash (or wo...
ChangeYourPassword
How to change your password on the Nevis Linux Cluster The primary audience of this page are those who don't login to the Nevis Linux cluster directly, bu...
Conda
Conda Conda is a popular package management system. Here are some tips and tricks for using that system on the Nevis particle physics systems. Before you go to c...
Condor
Condor Basics This page describes some of the basics for setting up jobs on the particle physics computer cluster at Nevis. For a quick introduction to condor at...
ConfiguringAlpine
Configuring alpine Alpine is a text only screen based mail program. (The previous version was called pine. This version is still present on some older systems at ...
EnvironmentModules
Environment modules on the Nevis particle physics Linux cluster Environment modules are a way of setting up a Linux shell environment. On the cluster, we ...
Evd
LArLite event display (evd) at Nevis To set up the event display using the bash shell (the only one supported), use the following command: source /nevis/amsterdam...
GENIE
Running GENIE at Nevis To run the GENIE Neutrino Monte Carlo at Nevis, you can take one of two approaches: * Use a software suite (GENIE and its external packa...
Glossary
Glossary Some TLAs and definitions to help you get started. (What's a "TLA"? Look it up below.) The terms are not in alphabetical order; they are roughly in ord...
HiddenPackages
Hidden directories and package management If you use either conda or pip to manage software packages, or work with keras,you may have encountered something st...
IPython
Jupyter notebook server at Nevis Jupyter (formerly IPython) has become a popular tool for interactive physics analysis. Here are some examples of what you can do ...
InitialLaptopSetup
Initial laptop setup for the Nevis particle physics Linux cluster This page is intended for those students, guests, and researchers connecting to Nevis for the fi...
JupyterROOTContainers
Jupyter/ROOT Containers Users of the Nevis particle physics Linux cluster have access to a notebook server that lets them execute Python and ROOT C scripts o...
LArSoftAtNevis
LArSoft at Nevis This documents how to use the LArSoft and MicroBooNE software as managed by mrb git. If you are looking for older LArSoft versions managed by SRT...
LArSoftAtNevisSRT
LArSoft at Nevis The Nevis copy of the LArSoft installation is currently in /a/share/westside/seligman/microboone/LArSoft. As of 21 Jan 2014, the following Fermil...
LinuxCluster
Nevis Linux Cluster Overview The Nevis Linux Cluster may seem a bit confusing at first. It's actually several smaller clusters linked together. Each working gro...
LinuxFAQ
Nevis Linux Cluster FAQ The answers to many Frequently Asked Questions about the Nevis Linux cluster. It covers subjects not addressed by the other Linux cluste...
PacemakerDiagnostics
Basic diagnostics for the high availability cluster Archived 20 Sep 2013: The high availability cluster has been set aside in favor of a more traditional single b...
ScienceHonorsProgram
SHP Particle Physics Fall 2018 Introduction (September 22nd, 2018): 2018Fall_SHP_Week1.pdfHistory (September 29nd, 2018): Week2.pdfRelativity (October 6th, 201...
Setup
Nevis Local Software These are commands developed or enhanced at Nevis for our own use. (Other sites, such as Fermilab, have defined their own versions of these c...
SoftwareGuide
Nevis Software Guide In addition to the notes below and in linked web pages, you should also look at the latest nevis linux announcements for descriptions of new ...
WhyConda
Why the shift from module load to conda? I know the shift from module load root to conda activate /usr/nevis/conda/root can be annoying. These are the reasons why...
X11OnLaptops
Setting up X11 and OpenGL on your laptop/desktop X11 X11 is the graphics display protocol used by UNIX systems. If you're logging into one of the Nevis systems w...
Number of topics: 24
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